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| Registros recuperados : 10 | |
| 3. |  | MARTINATI, J. C.; CARDOSO, D. C.; GUERREIRO-FILHO, O.; VIDAL, R. O.; CARAZZOLLE, M. F.; MALUF, M. P. Caracterização molecular da interação cafeeiro/bicho-mineiro. In: SIMPÓSIO DE PESQUISA DOS CAFÉS DO BRASIL, 7., 2011, Araxá. Anais... Brasília, DF: Embrapa Café, 2011.| Biblioteca(s): Embrapa Café. |
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| 4. | | RODRIGUES, T. B.; KHAJURIA, C.; WANG, H.; MATZ, N.; CARDOSO, D. C.; VALICENTE, F. H.; ZHOU, X.; SIEGFRIED, B. Validation of reference housekeeping genes for gene expression studies in western corn rootworm (Diabrotica virgifera virgifera). Plos One, San Francisco,v. 9, n. 10, p. 1-8, Oct. 2014.| Biblioteca(s): Embrapa Milho e Sorgo. |
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| 5. | | PADILHA, L.; SCHENK, J. C. M.; ORTEGA, H. M.; CARDOSO, D. C.; KAMIMURA, E. H.; ROSA, S. D. V. F.; MALUF, M. P. Expressão de genes relacionados ao estresse oxidativo em sementes de café armazenadas. In: CONGRESSO BRASILEIRO DE SEMENTES, 18., 2013, Florianópolis, SC. A semente na produtividade agrícola e na conservação de recursos genéticos. Londrina, PR: Associação Brasileira de Tecnologia de Sementes, 2013.| Biblioteca(s): Embrapa Café. |
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| 6. | | MARTINATI, J. C.; CARDOSO, D. C.; VIDAL, R. O.; CARAZZOLLE, M. F.; GIACHETTO, P. F.; PADILHA, L.; GUERREIRO-FILHO, O.; MALUF, M. P. Large-escale expression of genes related to phytoalexins, phenols, flavonoids and lignin biosynthesis in coffee plants infested with leaf-miner. In: INTERNATIONAL CONFERENCE ON COFFEE SCIENCE, 24., 2012, Costa Rica. Programme & abstracts. [S.l.]: Association for Science and Information on Coffee, 2012. p. 83. B11. ASIC 2012.| Biblioteca(s): Embrapa Agricultura Digital. |
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| 7. | | MARTINATI, J. C.; CARDOSO, D. C.; VIDAL, R. O.; CARAZZOLLE, M. F.; GIACHETTO, P. F.; PADILHA, L.; OLIVEIRA FILHO, G.; MALUF, M. P. Large-escale expression of genes related to phytoalexins, phenols, flavonoids and lignin biosynthesis in coffee plants infested with leaf-miner. In: INTERNATIONAL CONFERENCE ON COFFEE SCIENCE, 24., 2012, Costa Rica. Programme & abstracts. [S.l.]: Association for Science and Information on Coffee, 2012. p. 83 B11. ASIC 2012.| Biblioteca(s): Embrapa Café. |
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| 8. | | CARDOSO, D. C.; MARTINATI, J. C.; GIACHETTO, P. F.; VIDAL, R. O.; CARAZZOLLE, M. F.; PADILHA, L.; GUERREIRO-FILHO, O.; MALUF, M. P. Large-scale analysis of differential gene expression in coffee genotypes resistant and susceptible to leaf miner-toward the identification of candidate genes for marker assisted-selection. BMC Genomics, London, v. 15, p. 1-20, 2014.| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Café. |
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| 9. | | GHINI, R.; MAC LEOD, R. E. de O.; TORRE NETO, A.; CARDOSO, D. C.; BETTIOL, W.; MORAIS, L. A. S. de; VIQUE, B. Increased atmospheric carbon dioxide concentration: effects on eucalypt rust (Puccinia psidii), C:N ratio and essential oils in eucalypt clonal plantlets. Forest Pathology, Hamburg, v. 44, n. 5, p. 409-416, 2014.| Biblioteca(s): Embrapa Agroindústria de Alimentos; Embrapa Instrumentação; Embrapa Meio Ambiente. |
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| 10. | | SANTOS, L. L. dos; PROSDOCIMI, F.; LIMA, N. C. B.; COSTA, I. R. da; CARDOSO, D. C.; DRUMMOND, M. G.; BRASIL, B. dos S. A. F.; BASTIANETTO, E.; OLIVEIRA, D. A. A. de. Comparative genomics and phylogenomics of Trichostrongyloidea mitochondria reveal insights for molecular diagnosis and evolutionary biology of nematode worms. Gene Reports, v. 9, p. 65-73, 2017.| Biblioteca(s): Embrapa Agroenergia. |
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| Registros recuperados : 10 | |
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Registro Completo
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Biblioteca(s): |
Embrapa Milho e Sorgo. |
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Data corrente: |
07/11/2014 |
|
Data da última atualização: |
23/05/2017 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Circulação/Nível: |
A - 1 |
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Autoria: |
RODRIGUES, T. B.; KHAJURIA, C.; WANG, H.; MATZ, N.; CARDOSO, D. C.; VALICENTE, F. H.; ZHOU, X.; SIEGFRIED, B. |
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Afiliação: |
FERNANDO HERCOS VALICENTE, CNPMS. |
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Título: |
Validation of reference housekeeping genes for gene expression studies in western corn rootworm (Diabrotica virgifera virgifera). |
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Ano de publicação: |
2014 |
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Fonte/Imprenta: |
Plos One, San Francisco,v. 9, n. 10, p. 1-8, Oct. 2014. |
|
DOI: |
10.1371/journal.pone.0109825 |
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Idioma: |
Inglês |
|
Conteúdo: |
Quantitative Real-time PCR (qRT-PCR) is a powerful technique to investigate comparative gene expression. In general, normalization of results using a highly stable housekeeping gene (HKG) as an internal control is recommended and necessary. However, there are several reports suggesting that regulation of some HKGs is affected by different conditions. The western corn rootworm (WCR), Diabrotica virgifera virgifera LeConte (Coleoptera: Chrysomelidae), is a serious pest of corn in the United States and Europe. The expression profile of target genes related to insecticide exposure, resistance, and RNA interference has become an important experimental technique for study of western corn rootworms; however, lack of information on reliable HKGs under different conditions makes the interpretation of qRT-PCR results difficult. In this study, four distinct algorithms (Genorm, NormFinder, BestKeeper and delta-CT) and five candidate HKGs to genes of reference (b-actin; GAPDH, glyceraldehyde 3-phosphate dehydrogenase; b-tubulin; RPS9, ribosomal protein S9; EF1a, elongation factor-1a) were evaluated to determine the most reliable HKG under different experimental conditions including exposure to dsRNA and Bt toxins and among different tissues and developmental stages. Although all the HKGs tested exhibited relatively stable expression among the different treatments, some differences were noted. Among the five candidate reference genes evaluated, b-actin exhibited highly stable expression among different life stages. RPS9 exhibited the most similar pattern of expression among dsRNA treatments, and both experiments indicated that EF1a was the second most stable gene. EF1a was also the most stable for Bt exposure and among different tissues. These results will enable researchers to use more accurate and reliable normalization of qRT-PCR data in WCR experiments. MenosQuantitative Real-time PCR (qRT-PCR) is a powerful technique to investigate comparative gene expression. In general, normalization of results using a highly stable housekeeping gene (HKG) as an internal control is recommended and necessary. However, there are several reports suggesting that regulation of some HKGs is affected by different conditions. The western corn rootworm (WCR), Diabrotica virgifera virgifera LeConte (Coleoptera: Chrysomelidae), is a serious pest of corn in the United States and Europe. The expression profile of target genes related to insecticide exposure, resistance, and RNA interference has become an important experimental technique for study of western corn rootworms; however, lack of information on reliable HKGs under different conditions makes the interpretation of qRT-PCR results difficult. In this study, four distinct algorithms (Genorm, NormFinder, BestKeeper and delta-CT) and five candidate HKGs to genes of reference (b-actin; GAPDH, glyceraldehyde 3-phosphate dehydrogenase; b-tubulin; RPS9, ribosomal protein S9; EF1a, elongation factor-1a) were evaluated to determine the most reliable HKG under different experimental conditions including exposure to dsRNA and Bt toxins and among different tissues and developmental stages. Although all the HKGs tested exhibited relatively stable expression among the different treatments, some differences were noted. Among the five candidate reference genes evaluated, b-actin exhibited highly stable expression a... Mostrar Tudo |
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Thesagro: |
Gene; Genética; Lagarta; Praga de planta. |
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Thesaurus NAL: |
Plant pests. |
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Categoria do assunto: |
-- |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/111142/1/Validation-reference.pdf
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Marc: |
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024 7 $a10.1371/journal.pone.0109825$2DOI
100 1 $aRODRIGUES, T. B.
245 $aValidation of reference housekeeping genes for gene expression studies in western corn rootworm (Diabrotica virgifera virgifera).$h[electronic resource]
260 $c2014
520 $aQuantitative Real-time PCR (qRT-PCR) is a powerful technique to investigate comparative gene expression. In general, normalization of results using a highly stable housekeeping gene (HKG) as an internal control is recommended and necessary. However, there are several reports suggesting that regulation of some HKGs is affected by different conditions. The western corn rootworm (WCR), Diabrotica virgifera virgifera LeConte (Coleoptera: Chrysomelidae), is a serious pest of corn in the United States and Europe. The expression profile of target genes related to insecticide exposure, resistance, and RNA interference has become an important experimental technique for study of western corn rootworms; however, lack of information on reliable HKGs under different conditions makes the interpretation of qRT-PCR results difficult. In this study, four distinct algorithms (Genorm, NormFinder, BestKeeper and delta-CT) and five candidate HKGs to genes of reference (b-actin; GAPDH, glyceraldehyde 3-phosphate dehydrogenase; b-tubulin; RPS9, ribosomal protein S9; EF1a, elongation factor-1a) were evaluated to determine the most reliable HKG under different experimental conditions including exposure to dsRNA and Bt toxins and among different tissues and developmental stages. Although all the HKGs tested exhibited relatively stable expression among the different treatments, some differences were noted. Among the five candidate reference genes evaluated, b-actin exhibited highly stable expression among different life stages. RPS9 exhibited the most similar pattern of expression among dsRNA treatments, and both experiments indicated that EF1a was the second most stable gene. EF1a was also the most stable for Bt exposure and among different tissues. These results will enable researchers to use more accurate and reliable normalization of qRT-PCR data in WCR experiments.
650 $aPlant pests
650 $aGene
650 $aGenética
650 $aLagarta
650 $aPraga de planta
700 1 $aKHAJURIA, C.
700 1 $aWANG, H.
700 1 $aMATZ, N.
700 1 $aCARDOSO, D. C.
700 1 $aVALICENTE, F. H.
700 1 $aZHOU, X.
700 1 $aSIEGFRIED, B.
773 $tPlos One, San Francisco,v. 9$gn. 10, p. 1-8, Oct. 2014.
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Embrapa Milho e Sorgo (CNPMS) |
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